Version 5.4
Mus musculus Protein: Rbm39
Summary
InnateDB Protein IDBP-535765.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rbm39
Protein Name RNA binding motif protein 39
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000116950
InnateDB Gene IDBG-210839 (Rbm39)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 18 experimentally validated interaction(s) in this database.
They are also associated with 94 interaction(s) predicted by orthology.
Experimentally validated
Total 18 [view]
Protein-Protein 18 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 94 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003713 transcription coactivator activity
GO:0003723 RNA binding
GO:0005515 protein binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006397 mRNA processing
GO:2001141 regulation of RNA biosynthetic process
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID MGI:2157953
InterPro IPR000504 RNA recognition motif domain
IPR006509 Splicing factor, RBM39-like
PFAM PF00076
PRINTS
PIRSF
SMART SM00360
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL Q3TJP1
UniProt Splice Variant
Entrez Gene 170791
UniGene Mm.486173
RefSeq
MGI ID
MGI Symbol Rbm39
OMIM
CCDS
HPRD
IMGT
EMBL AK167355 AL929404 BX649640
GenPept BAE39454

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca