InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Zcrb1

Summary

InnateDB Protein

IDBP-538512.3

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Zcrb1

Protein Name

zinc finger CCHC-type and RNA binding motif 1

Synonyms

2700088M22Rik; Madp-1;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000124549

InnateDB Gene

IDBG-176703 (Zcrb1)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Nucleus, nucleoplasm {ECO:0000250}.

Disease Associations

Tissue Specificity

Expressed at higher level in heart and testis, and at lower level in cerebellum. Weakly expressed at low level in liver. {ECO:0000269PubMed:16959469}.

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.

Predicted by orthology
Total	5 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding
GO:0003723	RNA binding
GO:0008270	zinc ion binding

Biological Process

GO:0006397	mRNA processing
GO:0008380	RNA splicing

Cellular Component

GO:0005654	nucleoplasm
GO:0005689	U12-type spliceosomal complex

Protein Structure and Domains

PDB ID

MGI:1914447

InterPro

IPR000504 RNA recognition motif domain
IPR001878 Zinc finger, CCHC-type
IPR003954 RNA recognition motif domain, eukaryote

PFAM

PF00076
PF00098

PRINTS

PIRSF

SMART

SM00360
SM00343
SM00361

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

Q9CZ96

PhosphoSite

PhosphoSite-Q9CZ96

TrEMBL

UniProt Splice Variant

Entrez Gene

67197

UniGene

Mm.293181

RefSeq

MGI ID

MGI Symbol

Zcrb1

OMIM

CCDS

HPRD

IMGT

EMBL

AB095989 AK012852 AK170136 BC058368

GenPept

AAH58368 BAB28513 BAC23140 BAE41588