Version 5.4
Mus musculus Protein: Sdc1
Summary
InnateDB Protein IDBP-541158.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Sdc1
Protein Name syndecan 1
Synonyms AA408134; AA409076; CD138; Sstn; syn-1; Synd; Synd1;
Species Mus musculus
Ensembl Protein ENSMUSP00000123896
InnateDB Gene IDBG-128466 (Sdc1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 13 interaction(s) predicted by orthology.
Experimentally validated
Total 4 [view]
Protein-Protein 3 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 13 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0001948 glycoprotein binding
GO:0008092 cytoskeletal protein binding
Biological Process
GO:0060070 canonical Wnt signaling pathway
Cellular Component
GO:0009897 external side of plasma membrane
GO:0009986 cell surface
Protein Structure and Domains
PDB ID MGI:1349162
InterPro IPR027789 Syndecan/Neurexin domain
PFAM PF01034
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL E0CYT6
UniProt Splice Variant
Entrez Gene 20969
UniGene Mm.436389
RefSeq
MGI ID
MGI Symbol Sdc1
OMIM
CCDS
HPRD
IMGT
EMBL AC154906
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca