Version 5.4
Mus musculus Protein: Prpf40a
Summary
InnateDB Protein IDBP-542831.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Prpf40a
Protein Name PRP40 pre-mRNA processing factor 40 homolog A (yeast)
Synonyms 2810012K09Rik; FBP11; Fnbp11; Fnbp3;
Species Mus musculus
Ensembl Protein ENSMUSP00000117406
InnateDB Gene IDBG-171245 (Prpf40a)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 15 experimentally validated interaction(s) in this database.
They are also associated with 91 interaction(s) predicted by orthology.
Experimentally validated
Total 15 [view]
Protein-Protein 15 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 91 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0070064 proline-rich region binding
Biological Process
Cellular Component
Protein Structure and Domains
PDB ID MGI:1860512
InterPro IPR001202 WW domain
IPR002713 FF domain
PFAM PF00397
PF01846
PRINTS
PIRSF
SMART SM00456
SM00441
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL A2AQW6
UniProt Splice Variant
Entrez Gene 56194
UniGene Mm.486887
RefSeq
MGI ID
MGI Symbol Prpf40a
OMIM
CCDS
HPRD
IMGT
EMBL AL845170
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca