Version 5.4
Homo sapiens Protein: PRPF39
Summary
InnateDB Protein IDBP-5533.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PRPF39
Protein Name PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000348010
InnateDB Gene IDBG-5531 (PRPF39)
Protein Structure
UniProt Annotation
Function Involved in pre-mRNA splicing. {ECO:0000250}.
Subcellular Localization Nucleus {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 9 experimentally validated interaction(s) in this database.
Experimentally validated
Total 9 [view]
Protein-Protein 9 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0006396 RNA processing
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
Protein Structure and Domains
PDB ID
InterPro IPR003107 HAT (Half-A-TPR) repeat
PFAM PF02184
PRINTS
PIRSF
SMART SM00386
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q86UA1
PhosphoSite PhosphoSite-Q86UA1
TrEMBL
UniProt Splice Variant
Entrez Gene 55015
UniGene Hs.642460
RefSeq NP_060392
HUGO HGNC:20314
OMIM 614907
CCDS CCDS9682
HPRD 17913
IMGT
EMBL AK001990 AL121809 BC051886 BC125126 BC125127
GenPept AAH51886 AAI25127 AAI25128 BAA92024

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca