InnateDB: Systems Biology of the Innate Immune Response

Homo sapiens Protein: SNRPB2

Summary

InnateDB Protein

IDBP-55611.5

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

SNRPB2

Protein Name

small nuclear ribonucleoprotein polypeptide B

Synonyms

Msl1;

Species

Homo sapiens

Ensembl Protein

ENSP00000246071

InnateDB Gene

IDBG-55609 (SNRPB2)

Protein Structure

UniProt Annotation

Function

Involved in pre-mRNA splicing. This protein is associated with snRNP U2. It binds stem loop IV of U2 snRNA only in presence of the U2A' protein.

Subcellular Localization

Nucleus.

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 49 experimentally validated interaction(s) in this database.

Experimentally validated
Total	49 [view]
Protein-Protein	49 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding
GO:0005515	protein binding
GO:0017069	snRNA binding

Biological Process

GO:0000398	mRNA splicing, via spliceosome
GO:0006397	mRNA processing
GO:0008380	RNA splicing
GO:0010467	gene expression

Cellular Component

GO:0005634	nucleus
GO:0005654	nucleoplasm
GO:0005681	spliceosomal complex
GO:0005686	U2 snRNP
GO:0005730	nucleolus
GO:0071013	catalytic step 2 spliceosome

Protein Structure and Domains

PDB ID

InterPro

IPR000504 RNA recognition motif domain

PFAM

PF00076

PRINTS

PIRSF

SMART

SM00360

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

P08579

PhosphoSite

PhosphoSite-P08579

TrEMBL

UniProt Splice Variant

Entrez Gene

6629

UniGene

RefSeq

HUGO

HGNC:11155

OMIM

603520

CCDS

CCDS13123

HPRD

04628

IMGT

EMBL

AK313004 AL034428 BC018022 BC036737 CH471133 M15841

GenPept

AAA36796 AAH18022 AAH36737 BAG35840 CAB38777 EAX10284 EAX10285