Version 5.4
Homo sapiens Protein: TRERF1
Summary
InnateDB Protein IDBP-585252.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TRERF1
Protein Name transcriptional regulating factor 1
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000439689
InnateDB Gene IDBG-87179 (TRERF1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 13 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 13 [view]
Protein-Protein 11 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 1 [view]
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0046872 metal ion binding
Biological Process
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Protein Structure and Domains
PDB ID
InterPro IPR000949 ELM2 domain
IPR001005 SANT/Myb domain
IPR007087 Zinc finger, C2H2
IPR009057 Homeodomain-like
IPR015880 Zinc finger, C2H2-like
PFAM PF01448
PF00249
PF00096
PRINTS
PIRSF
SMART SM00717
SM00355
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-Q05GC8
TrEMBL Q05GC8
UniProt Splice Variant
Entrez Gene 55809
UniGene Hs.610491
RefSeq NP_001284503
HUGO HGNC:18273
OMIM 610322
CCDS CCDS75455
HPRD 11647
IMGT
EMBL AL096814 AL138735 AL450325 AM404182
GenPept CAL49296

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca