Version 5.4
Homo sapiens Protein: TRIM42
Summary
InnateDB Protein IDBP-58979.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TRIM42
Protein Name tripartite motif containing 42
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000286349
InnateDB Gene IDBG-58977 (TRIM42)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
Biological Process
GO:0045087 innate immune response (InnateDB)
Cellular Component
GO:0005622 intracellular
Protein Structure and Domains
PDB ID
InterPro IPR000315 Zinc finger, B-box
IPR001841 Zinc finger, RING-type
IPR003961 Fibronectin, type III
PFAM PF00643
PF13639
PF14634
PF00041
PF01108
PRINTS
PIRSF
SMART SM00336
SM00184
SM00060
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q8IWZ5
PhosphoSite PhosphoSite-Q8IWZ5
TrEMBL
UniProt Splice Variant
Entrez Gene 287015
UniGene Hs.343487
RefSeq NP_689829
HUGO HGNC:19014
OMIM
CCDS CCDS3113
HPRD 15559
IMGT
EMBL AC026324 AF521868 AK097416 AL833848 BC130472 CH471052
GenPept AAI30473 AAO14945 BAC05042 CAD38707 EAW79015

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca