Version 5.4
Homo sapiens Protein: VIPAS39
Summary
InnateDB Protein IDBP-598175.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol VIPAS39
Protein Name chromosome 14 open reading frame 133
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000451857
InnateDB Gene IDBG-13870 (VIPAS39)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 21 experimentally validated interaction(s) in this database.
Experimentally validated
Total 21 [view]
Protein-Protein 20 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006886 intracellular protein transport
GO:0007283 spermatogenesis
GO:0008333 endosome to lysosome transport
GO:0030154 cell differentiation
Cellular Component
GO:0005737 cytoplasm
GO:0005769 early endosome
GO:0005770 late endosome
GO:0016023 cytoplasmic membrane-bounded vesicle
GO:0030897 HOPS complex
GO:0055037 recycling endosome
Protein Structure and Domains
PDB ID
InterPro IPR019177 Golgin subfamily A member 5
PFAM PF09787
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL Q6IA61
UniProt Splice Variant
Entrez Gene 63894
UniGene Hs.16157
RefSeq
HUGO HGNC:20347
OMIM 613401
CCDS
HPRD 10710
IMGT
EMBL AF111168 AK022769 AK022925 AK024661 AK098254 AK298354 BC015054 CH471061 CR457294
GenPept AAD09624 AAH15054 BAB14237 BAB14310 BAB14951 BAG53601 BAG60598 CAG33575 EAW81286 EAW81288 EAW81289 EAW81290

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca