InnateDB Protein
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IDBP-621015.3
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Last Modified
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2014-10-13 [Report errors or provide feedback]
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Gene Symbol
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Rfx3
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Protein Name
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regulatory factor X, 3 (influences HLA class II expression)
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Synonyms
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C230093O12Rik; MRFX3;
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Species
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Mus musculus
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Ensembl Protein
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ENSMUSP00000133461
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InnateDB Gene
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IDBG-156327 (Rfx3)
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Protein Structure
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Function |
Transcription factor required for ciliogenesis and islet cell differentiation during endocrine pancreas development. Essential for the differentiation of nodal monocilia and left- right asymmetry specification during embryogenesis. Required for the biogenesis of motile cilia by governing growth and beating efficiency of motile cells. Also required for ciliated ependymal cell differentiation. Together with RFX6, participates in the differentiation of 4 of the 5 islet cell types during endocrine pancreas development, with the exception of pancreatic PP (polypeptide-producing) cells. Regulates transcription by forming a heterodimer with another RFX protein and binding to the X-box in the promoter of target genes. Regulates the expression of genes involved in ciliary assembly (DYNC2LI1, FOXJ1 and BBS4) and genes involved in ciliary motility (DNAH11, DNAH9 and DNAH5). Represses transcription of MAP1A in non-neuronal cells but not in neuronal cells. {ECO:0000269PubMed:15121860, ECO:0000269PubMed:16930429, ECO:0000269PubMed:17229940, ECO:0000269PubMed:19671664}.
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Subcellular Localization |
Nucleus {ECO:0000255PROSITE- ProRule:PRU00858, ECO:0000269PubMed:19671664}.
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Disease Associations |
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Tissue Specificity |
Expressed in ciliated cells of the node and in the ciliated ependymal cells of the subcommissural organ (SCO), choroid plexuses (CP) and ventricular walls during embryonic and postnatal development. Expressed in developing and mature pancreatic endocrine cells during embryogenesis and in adults (at protein level). {ECO:0000269PubMed:15121860, ECO:0000269PubMed:16930429, ECO:0000269PubMed:17229940}.
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Comments |
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Number of Interactions
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This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 9 interaction(s) predicted by orthology.
Experimentally validated |
Total |
1
[view]
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Protein-Protein |
1
[view]
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Protein-DNA |
0
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Protein-RNA |
0
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DNA-DNA |
0
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RNA-RNA |
0
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DNA-RNA |
0
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Predicted by orthology |
Total |
9 [view]
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Molecular Function |
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Biological Process |
GO:0006351
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transcription, DNA-templated
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GO:0006355
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regulation of transcription, DNA-templated
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GO:0007368
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determination of left/right symmetry
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GO:0031018
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endocrine pancreas development
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GO:0042384
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cilium assembly
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GO:0045892
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negative regulation of transcription, DNA-templated
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GO:0045893
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positive regulation of transcription, DNA-templated
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GO:0045944
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positive regulation of transcription from RNA polymerase II promoter
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GO:0048469
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cell maturation
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GO:0050796
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regulation of insulin secretion
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GO:0060285
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cilium-dependent cell motility
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GO:0060287
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epithelial cilium movement involved in determination of left/right asymmetry
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GO:0072560
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type B pancreatic cell maturation
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GO:2000078
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positive regulation of type B pancreatic cell development
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Cellular Component |
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PDB ID |
MGI:106582
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InterPro |
IPR003150
DNA-binding RFX-type winged-helix domain
IPR007668
RFX1 transcription activation region
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PFAM |
PF02257
PF04589
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PRINTS |
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PIRSF |
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SMART |
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TIGRFAMs |
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Modification |
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SwissProt |
P48381
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PhosphoSite |
PhosphoSite-P48381
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TrEMBL |
G3UZZ6
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UniProt Splice Variant |
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Entrez Gene |
19726
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UniGene |
Mm.394476
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RefSeq |
NP_035395
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MGI ID |
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MGI Symbol |
Rfx3
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OMIM |
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CCDS |
CCDS29725
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HPRD |
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IMGT |
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EMBL |
AC118005
AC118628
AK030008
AK041120
BC017598
X76090
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GenPept |
AAH17598
BAC26730
BAC30829
CAA53704
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