Version 5.4
Mus musculus Protein: Taf4b
Summary
InnateDB Protein IDBP-621420.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Taf4b
Protein Name TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
Synonyms 105kDa; 2610524B04Rik; 4932409F03Rik; AW987595; Taf2c2; TAFII105;
Species Mus musculus
Ensembl Protein ENSMUSP00000126909
InnateDB Gene IDBG-129447 (Taf4b)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0046982 protein heterodimerization activity
GO:0051059 NF-kappaB binding
Biological Process
GO:0006352 DNA-templated transcription, initiation
GO:0006355 regulation of transcription, DNA-templated
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0006366 transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
GO:0005667 transcription factor complex
GO:0005669 transcription factor TFIID complex
GO:0005730 nucleolus
Protein Structure and Domains
PDB ID MGI:2152345
InterPro IPR003894 TAFH/NHR1
IPR007900 Transcription initiation factor TFIID component TAF4
IPR009072 Histone-fold
PFAM PF07531
PF05236
PRINTS
PIRSF
SMART SM00549
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-Q8C0S6
TrEMBL Q8C0S6
UniProt Splice Variant
Entrez Gene 72504
UniGene Mm.412313
RefSeq NP_001093919
MGI ID
MGI Symbol Taf4b
OMIM
CCDS CCDS50227
HPRD
IMGT
EMBL AC102692 AC125091 AC133172 AK029943 CH466622
GenPept BAC26692 EDL01590

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca