Version 5.4
Mus musculus Protein: Jmjd1c
Summary
InnateDB Protein IDBP-625875.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Jmjd1c
Protein Name jumonji domain containing 1C
Synonyms 5430433L24Rik; D630035I23Rik; Jmjdic; TRIP8;
Species Mus musculus
Ensembl Protein ENSMUSP00000134551
InnateDB Gene IDBG-159742 (Jmjd1c)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 9 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 9 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0016568 chromatin modification
GO:0055114 oxidation-reduction process
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID MGI:1918614
InterPro IPR003347 JmjC domain
PFAM PF02373
PF08007
PRINTS
PIRSF
SMART SM00558
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL G3UZM1
UniProt Splice Variant
Entrez Gene 108829
UniGene Mm.484351
RefSeq XP_006513098
MGI ID
MGI Symbol Jmjd1c
OMIM
CCDS
HPRD
IMGT
EMBL AC155712 AC156272 AK077400 AK082106 AK085500 AK173162 BC068318
GenPept AAH68318 BAC36783 BAC38410 BAC39458 BAD32440

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca