Version 5.4
Bos taurus Protein: SF3B1
Summary
InnateDB Protein IDBP-695438.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SF3B1
Protein Name splicing factor 3b, subunit 1, 155kDa
Synonyms
Species Bos taurus
Ensembl Protein ENSBTAP00000011734
InnateDB Gene IDBG-642928 (SF3B1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 105 interaction(s) predicted by orthology.
Predicted by orthology
Total 105 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003682 chromatin binding
GO:0005488 binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0009952 anterior/posterior pattern specification
Cellular Component
GO:0005634 nucleus
GO:0005689 U12-type spliceosomal complex
GO:0043231 intracellular membrane-bounded organelle
GO:0071013 catalytic step 2 spliceosome
Protein Structure and Domains
PDB ID
InterPro IPR015016 Splicing factor 3B subunit 1
IPR016024 Armadillo-type fold
PFAM PF08920
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL F1MX61
UniProt Splice Variant
Entrez Gene 510177
UniGene Bt.97576
RefSeq NP_001179923
HUGO HGNC:10768
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02005513 DAAA02005514
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca