Version 5.4
Bos taurus Protein: ARID1A
Summary
InnateDB Protein IDBP-697804.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ARID1A
Protein Name AT rich interactive domain 1A (SWI-like)
Synonyms
Species Bos taurus
Ensembl Protein ENSBTAP00000001360
InnateDB Gene IDBG-645115 (ARID1A)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 52 interaction(s) predicted by orthology.
Predicted by orthology
Total 52 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0005488 binding
GO:0005515 protein binding
GO:0016922 ligand-dependent nuclear receptor binding
GO:0031491 nucleosome binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0001843 neural tube closure
GO:0003205 cardiac chamber development
GO:0003408 optic cup formation involved in camera-type eye development
GO:0006325 chromatin organization
GO:0006337 nucleosome disassembly
GO:0006338 chromatin remodeling
GO:0030520 intracellular estrogen receptor signaling pathway
GO:0030521 androgen receptor signaling pathway
GO:0030900 forebrain development
GO:0042921 glucocorticoid receptor signaling pathway
GO:0043044 ATP-dependent chromatin remodeling
GO:0045893 positive regulation of transcription, DNA-templated
GO:0060674 placenta blood vessel development
Cellular Component
GO:0000790 nuclear chromatin
GO:0005622 intracellular
GO:0005634 nucleus
GO:0016514 SWI/SNF complex
GO:0090544 BAF-type complex
Protein Structure and Domains
PDB ID
InterPro IPR001606 ARID/BRIGHT DNA-binding domain
IPR016024 Armadillo-type fold
IPR021906 Protein of unknown function DUF3518
PFAM PF01388
PF12031
PRINTS
PIRSF
SMART SM00501
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL E1B925
UniProt Splice Variant
Entrez Gene 540181
UniGene Bt.21378
RefSeq NP_001192714
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02006369 DAAA02006370 DAAA02006371
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca