InnateDB: Systems Biology of the Innate Immune Response

Bos taurus Protein: POP1

Summary

InnateDB Protein

IDBP-697856.2

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

POP1

Protein Name

processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)

Synonyms

Species

Bos taurus

Ensembl Protein

ENSBTAP00000016721

InnateDB Gene

IDBG-645172 (POP1)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 22 interaction(s) predicted by orthology.

Predicted by orthology
Total	22 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000171	ribonuclease MRP activity
GO:0004526	ribonuclease P activity
GO:0005515	protein binding
GO:0044822	poly(A) RNA binding

Biological Process

GO:0001682	tRNA 5'-leader removal
GO:0006396	RNA processing
GO:0016078	tRNA catabolic process
GO:0090501	RNA phosphodiester bond hydrolysis
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic

Cellular Component

GO:0000172	ribonuclease MRP complex
GO:0005615	extracellular space
GO:0005655	nucleolar ribonuclease P complex

Protein Structure and Domains

PDB ID

InterPro

IPR009723 Ribonuclease P/MRP, subunit POP1
IPR012590 POPLD

PFAM

PF06978
PF08170

PRINTS

PIRSF

SMART

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

TrEMBL

UniProt Splice Variant

Entrez Gene

UniGene

RefSeq

HUGO

OMIM

CCDS

HPRD

IMGT

EMBL

DAAA02039411

GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1)

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca