InnateDB: Systems Biology of the Innate Immune Response

Homo sapiens Protein: PGBD1

Summary

InnateDB Protein

IDBP-71886.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

PGBD1

Protein Name

piggyBac transposable element derived 1

Synonyms

Species

Homo sapiens

Ensembl Protein

ENSP00000259883

InnateDB Gene

IDBG-71884 (PGBD1)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.

Experimentally validated
Total	5 [view]
Protein-Protein	5 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003676	nucleic acid binding
GO:0003700	sequence-specific DNA binding transcription factor activity
GO:0005044	scavenger receptor activity

Biological Process

GO:0006355	regulation of transcription, DNA-templated
GO:0006898	receptor-mediated endocytosis

Cellular Component

GO:0005622	intracellular
GO:0005634	nucleus
GO:0016020	membrane

Protein Structure and Domains

PDB ID

InterPro

IPR001190 SRCR domain
IPR001909 Krueppel-associated box
IPR003309 Transcription regulator SCAN
IPR008916 Retrovirus capsid, C-terminal

PFAM

PF00530
PF01352
PF02023

PRINTS

PR00258

PIRSF

SMART

SM00349
SM00431

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

Q96JS3

PhosphoSite

PhosphoSite-Q96JS3

TrEMBL

UniProt Splice Variant

Entrez Gene

84547

UniGene

Hs.144527

RefSeq

NP_115896

HUGO

HGNC:19398

OMIM

CCDS

CCDS4648

HPRD

11426

IMGT

EMBL

AK223446 AL021997 BC069033 BC128585 D88259

GenPept

AAH69033 AAI28586 BAB46919 BAD97166 CAD21704