Version 5.4
Homo sapiens Protein: RDBP
Summary
InnateDB Protein IDBP-79702.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RDBP
Protein Name RD RNA binding protein
Synonyms D6S45; NELF-E; RD; RDBP; RDP;
Species Homo sapiens
Ensembl Protein ENSP00000364574
InnateDB Gene IDBG-79698 (RDBP)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 23 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 23 [view]
Protein-Protein 22 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003746 translation elongation factor activity
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006366 transcription from RNA polymerase II promoter
GO:0006368 transcription elongation from RNA polymerase II promoter
GO:0006414 translational elongation
GO:0008150 biological_process
GO:0010467 gene expression
GO:0016032 viral process
GO:0050434 positive regulation of viral transcription
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0032021 NELF complex
Protein Structure and Domains
PDB ID
InterPro IPR000504 RNA recognition motif domain
PFAM PF00076
PRINTS
PIRSF
SMART SM00360
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL Q9BQJ6
UniProt Splice Variant
Entrez Gene 7936
UniGene Hs.423935
RefSeq
HUGO HGNC:13974
OMIM 154040
CCDS
HPRD 01096
IMGT
EMBL AF019413 AK302652 AL049547 AL645922 AL662849 AL844853 BC025235 BC050617 BX005143 CH471081 CR388219 CR753845 CR759782 L03411 M32274 M32275 M32276 M33230 M33231 U37117 X16105
GenPept AAA36308 AAB67979 AAC37523 AAH25235 AAH50617 AAK29466 BAG63891 CAA34231 CAB89308 CAI17457 CAI41861 CAM25865 CAQ07114 CAQ07466 CAQ09275 CAQ10906 EAX03553

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca