Homo sapiens Protein: LDB3
Summary
InnateDB Protein IDBP-81011.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LDB3
Protein Name LIM domain binding 3
Synonyms CMD1C; CMPD3; CYPHER; LDB3Z1; LDB3Z4; LVNC3; MFM4; ORACLE; PDLIM6; ZASP;
Species Homo sapiens
Ensembl Protein ENSP00000361126
InnateDB Gene IDBG-80995 (LDB3)
Protein Structure
UniProt Annotation
Function May function as an adapter in striated muscle to couple protein kinase C-mediated signaling via its LIM domains to the cytoskeleton. {ECO:0000305}.
Subcellular Localization Cytoplasm, perinuclear region {ECO:0000269PubMed:10427098}. Cell projection, pseudopodium {ECO:0000269PubMed:10427098}. Cytoplasm, cytoskeleton {ECO:0000269PubMed:10427098}. Cytoplasm, myofibril, sarcomere, Z line {ECO:0000269PubMed:10427098}. Note=Localized to the cytoplasm around nuclei and pseudopodia of undifferentiated cells and detected throughout the myotubes of differentiated cells. Colocalizes with ACTN2 at the Z-lines.
Disease Associations Cardiomyopathy, dilated 1C (CMD1C) [MIM:601493]: A disorder characterized by ventricular dilation and impaired systolic function, resulting in congestive heart failure and arrhythmia. Patients are at risk of premature death. Cardiomyopathy dilated type 1C is associated with left ventricular non-compaction in some patients. Left ventricular non-compaction is characterized by numerous prominent trabeculations and deep intertrabecular recesses in hypertrophied and hypokinetic segments of the left ventricle. {ECO:0000269PubMed:14660611, ECO:0000269PubMed:14662268}. Note=The disease is caused by mutations affecting the gene represented in this entry.Left ventricular non-compaction 3 (LVNC3) [MIM:601493]: A disease due to an arrest of myocardial morphogenesis. It is characterized by a hypertrophic left ventricle with deep trabeculations and with poor systolic function, with or without associated left ventricular dilation. In some cases, it is associated with other congenital heart anomalies. Note=The disease is caused by mutations affecting the gene represented in this entry.Myopathy, myofibrillar, 4 (MFM4) [MIM:609452]: A neuromuscular disorder characterized by distal and proximal muscle weakness with signs of cardiomyopathy and neuropathy. Note=The disease is caused by mutations affecting the gene represented in this entry.
Tissue Specificity Expressed primarily in skeletal muscle and to a lesser extent in heart. Also detected in brain and placenta. {ECO:0000269PubMed:10427098}.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 10 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 10 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008092 cytoskeletal protein binding
GO:0008270 zinc ion binding
Biological Process
Cellular Component
GO:0005856 cytoskeleton
GO:0030018 Z disc
GO:0031143 pseudopodium
GO:0048471 perinuclear region of cytoplasm
Protein Structure and Domains
PDB ID
InterPro IPR001478 PDZ domain
IPR006643 ZASP
PFAM PF00595
PF13180
PRINTS
PIRSF
SMART SM00228
SM00735
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt O75112
PhosphoSite PhosphoSite-O75112
TrEMBL
UniProt Splice Variant
Entrez Gene 11155
UniGene Hs.657271
RefSeq NP_001165082
HUGO HGNC:15710
OMIM 605906
CCDS CCDS53549
HPRD 16172
IMGT
EMBL AB014513 AC067750 AF276807 AF276808 AF276809 AJ133766 AJ133767 AJ133768 AK304760 BC010929 EF179181
GenPept AAH10929 AAQ14316 AAQ14317 AAQ14318 ABN05284 BAA31588 BAG65515 CAB46727 CAB46728 CAB46729