Version 5.4
Homo sapiens Protein: COL6A1
Summary
InnateDB Protein IDBP-810502.1
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol COL6A1
Protein Name collagen, type VI, alpha 1
Synonyms OPLL;
Species Homo sapiens
Ensembl Protein ENSP00000483630
InnateDB Gene IDBG-6042 (COL6A1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 11 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 11 [view]
Protein-Protein 11 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Protein Structure and Domains
PDB ID
InterPro IPR002035 von Willebrand factor, type A
IPR008160 Collagen triple helix repeat
PFAM PF00092
PF01391
PRINTS
PIRSF
SMART SM00327
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL Q05BT9
UniProt Splice Variant
Entrez Gene 1291
UniGene
RefSeq
HUGO HGNC:2211
OMIM 120220
CCDS
HPRD
IMGT
EMBL BC032821
GenPept AAH32821

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca