InnateDB: Systems Biology of the Innate Immune Response

Homo sapiens Protein: FBXO6

Summary

InnateDB Protein

IDBP-89464.4

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

FBXO6

Protein Name

F-box protein 6

Synonyms

Species

Homo sapiens

Ensembl Protein

ENSP00000365944

InnateDB Gene

IDBG-89462 (FBXO6)

Protein Structure

UniProt Annotation

Function

Substrate-recognition component of some SCF (SKP1-CUL1- F-box protein)-type E3 ubiquitin ligase complexes. Involved in endoplasmic reticulum-associated degradation pathway (ERAD) for misfolded lumenal proteins by recognizing and binding sugar chains on unfolded glycoproteins that are retrotranlocated into the cytosol and promoting their ubiquitination and subsequent degradation. Able to recognize and bind denatured glycoproteins, which are modified with not only high-mannose but also complex- type oligosaccharides. Also recognizes sulfated glycans. Also involved in DNA damage response by specifically recognizing activated CHEK1 (phosphorylated on 'Ser-345'), promoting its ubiquitination and degradation. Ubiquitination of CHEK1 is required to insure that activated CHEK1 does not accumulate as cells progress through S phase, or when replication forks encounter transient impediments during normal DNA replication. {ECO:0000269PubMed:18203720, ECO:0000269PubMed:19716789}.

Subcellular Localization

Cytoplasm {ECO:0000269PubMed:19716789}.

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 609 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.

Experimentally validated
Total	609 [view]
Protein-Protein	609 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	2 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0001948	glycoprotein binding
GO:0004842	ubiquitin-protein transferase activity
GO:0005515	protein binding
GO:0030246	carbohydrate binding

Biological Process

GO:0000077	DNA damage checkpoint
GO:0006281	DNA repair
GO:0006508	proteolysis
GO:0006516	glycoprotein catabolic process
GO:0006986	response to unfolded protein
GO:0016567	protein ubiquitination
GO:0030433	ER-associated ubiquitin-dependent protein catabolic process
GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process