Version 5.4
Homo sapiens Protein: SNRNP40
Summary
InnateDB Protein IDBP-95415.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SNRNP40
Protein Name small nuclear ribonucleoprotein 40kDa (U5)
Synonyms 40K; HPRP8BP; PRP8BP; PRPF8BP; SPF38; WDR57;
Species Homo sapiens
Ensembl Protein ENSP00000362825
InnateDB Gene IDBG-95411 (SNRNP40)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 49 experimentally validated interaction(s) in this database.
Experimentally validated
Total 49 [view]
Protein-Protein 46 [view]
Protein-DNA 3 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Protein Structure and Domains
PDB ID
InterPro IPR001680 WD40 repeat
IPR017986 WD40-repeat-containing domain
PFAM PF00400
PRINTS
PIRSF
SMART SM00320
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL Q9NSS8
UniProt Splice Variant
Entrez Gene 9410
UniGene Hs.33962
RefSeq
HUGO HGNC:30857
OMIM 607797
CCDS
HPRD 08481
IMGT
EMBL AC114495 AL157420 AL451070 CH471059
GenPept CAB75650 EAX07627

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca