Version 5.4
Homo sapiens Protein: SF3B5
Summary
InnateDB Protein IDBP-97419.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SF3B5
Protein Name splicing factor 3b, subunit 5, 10kDa
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000356541
InnateDB Gene IDBG-97417 (SF3B5)
Protein Structure
UniProt Annotation
Function
Subcellular Localization Nucleus {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 26 experimentally validated interaction(s) in this database.
Experimentally validated
Total 26 [view]
Protein-Protein 25 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0000398 mRNA splicing, via spliceosome
GO:0008380 RNA splicing
GO:0010467 gene expression
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005689 U12-type spliceosomal complex
Protein Structure and Domains
PDB ID
InterPro IPR009846 Splicing factor 3B subunit 5/RDS3 complex subunit 10
IPR017089 Splicing factor 3B, subunit 5
PFAM PF07189
PRINTS
PIRSF PIRSF037010
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9BWJ5
PhosphoSite PhosphoSite-Q9BWJ5
TrEMBL
UniProt Splice Variant
Entrez Gene 83443
UniGene
RefSeq NP_112577
HUGO HGNC:21083
OMIM
CCDS CCDS5204
HPRD 18042
IMGT
EMBL AK312079 AL031390 BC000198 BK000562 CH471051
GenPept AAH00198 BAG35015 CAI19755 DAA00073 EAW47851

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca