Version 5.4
Mus musculus Gene: Phf3
Summary
InnateDB Gene IDBG-139931.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Phf3
Gene Name PHD finger protein 3
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000048874
Encoded Proteins
IDBP-139933
PHD finger protein 3
IDBP-788853
PHD finger protein 3
IDBP-788860
PHD finger protein 3
IDBP-788866
PHD finger protein 3
IDBP-788871
PHD finger protein 3
IDBP-788876
PHD finger protein 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000118482:
This gene encodes a member of a PHD finger-containing gene family. This gene may function as a transcription factor and may be involved in glioblastomas development. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2014]
Gene Information
Type Protein coding
Genomic Location Chromosome 1:30802339-30873921
Strand Reverse strand
Band A5
Transcripts
ENSMUST00000088310 ENSMUSP00000085650
ENSMUST00000186733 ENSMUSP00000139610
ENSMUST00000191329 ENSMUSP00000139662
ENSMUST00000190190
ENSMUST00000187316
ENSMUST00000186105
ENSMUST00000191245
ENSMUST00000191064 ENSMUSP00000140746
ENSMUST00000188847
ENSMUST00000187600
ENSMUST00000185521
ENSMUST00000188780 ENSMUSP00000140935
ENSMUST00000187968 ENSMUSP00000139454
ENSMUST00000185604
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
GO:0008270 zinc ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000118482
View Gene Order
ENSBTAG00000019139
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_001081080 XM_006495836 XM_006495837 XM_006495838 XM_006495840 XM_006495841
OMIM
CCDS CCDS35530
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca