Version 5.4
Homo sapiens Gene: PHF3
Summary
InnateDB Gene IDBG-91739.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PHF3
Gene Name PHD finger protein 3
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000118482
Encoded Proteins
IDBP-91741
PHD finger protein 3
IDBP-243714
PHD finger protein 3
IDBP-476958
PHD finger protein 3
IDBP-483632
PHD finger protein 3
IDBP-484793
PHD finger protein 3
IDBP-483908
PHD finger protein 3
IDBP-478718
PHD finger protein 3
IDBP-476205
PHD finger protein 3
IDBP-479990
PHD finger protein 3
IDBP-479301
PHD finger protein 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a member of a PHD finger-containing gene family. This gene may function as a transcription factor and may be involved in glioblastomas development. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2014]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:63635820-63779336
Strand Forward strand
Band q12
Transcripts
ENST00000262043 ENSP00000262043
ENST00000393387 ENSP00000377048
ENST00000420043
ENST00000506783 ENSP00000424694
ENST00000481385 ENSP00000425227
ENST00000515594 ENSP00000425338
ENST00000494284 ENSP00000424078
ENST00000509876 ENSP00000424994
ENST00000509330 ENSP00000422841
ENST00000514822 ENSP00000424197
ENST00000503248
ENST00000505138 ENSP00000421417
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
GO:0008270 zinc ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0007275 multicellular organismal development
Cellular Component
GO:0005575 cellular_component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000048874
View Gene Order
ENSBTAG00000019139
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.348921 Hs.605839 Hs.707853 Hs.713653 Hs.717625 Hs.731957 Hs.736848
RefSeq NM_001290259 NM_001290260 NM_015153 XM_005248701 XM_005248702 XM_005248703 XM_006715426 XM_006715427
HUGO
OMIM
CCDS CCDS4966
HPRD 08477
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca