Mus musculus Gene: Tcerg1
Summary
InnateDB Gene IDBG-143299.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Tcerg1
Gene Name transcription elongation regulator 1 (CA150)
Synonyms 2410022J09Rik; 2900090C16Rik; AI428505; ca150; CA150b; FBP23; FBP28; p144; Taf2s;
Species Mus musculus
Ensembl Gene ENSMUSG00000024498
Encoded Proteins
transcription elongation regulator 1 (CA150)
transcription elongation regulator 1 (CA150)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000113649:
This gene encodes a nuclear protein that regulates transcriptional elongation and pre-mRNA splicing. The encoded protein interacts with the hyperphosphorylated C-terminal domain of RNA polymerase II via multiple FF domains, and with the pre-mRNA splicing factor SF1 via a WW domain. Alternative splicing results in multiple transcripts variants encoding different isoforms. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 18:42511510-42575551
Strand Forward strand
Band B3
Transcripts
ENSMUST00000025375 ENSMUSP00000025375
ENSMUST00000173642 ENSMUSP00000134458
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 14 experimentally validated interaction(s) in this database.
They are also associated with 52 interaction(s) predicted by orthology.
Experimentally validated
Total 14 [view]
Protein-Protein 14 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 52 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0001103 RNA polymerase II repressing transcription factor binding
GO:0001106 RNA polymerase II transcription corepressor activity
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
GO:0070064 proline-rich region binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0006351 transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
Not yet available
SSD Ortholog
Ortholog supports species divergence
Pathways
NETPATH
REACTOME
KEGG
Spliceosome pathway
INOH
PID BIOCARTA
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
Spliceosome pathway
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt Q8CGF7
TrEMBL Q3TH57 Q61050
UniProt Splice Variant
Entrez Gene 56070
UniGene Mm.270511
RefSeq NM_001039474 XM_006526112
OMIM
CCDS CCDS29214
HPRD
IMGT
MGI ID MGI:1926421
MGI Symbol Tcerg1
EMBL AB023485 AK082750 AK168434 BC039185 BC040284 CH466528 U40748 U40749
GenPept AAC52476 AAC52477 AAH39185 AAH40284 BAA86392 BAC38600 BAE40341 EDL10029
RNA Seq Atlas 56070