Version 5.4
Mus musculus Gene: Ythdc2
Summary
InnateDB Gene IDBG-144657.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ythdc2
Gene Name YTH domain containing 2
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000034653
Encoded Proteins
IDBP-144659
YTH domain containing 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000047188:
Gene Information
Type Protein coding
Genomic Location Chromosome 18:44828665-44889720
Strand Forward strand
Band B3
Transcripts
ENSMUST00000037763 ENSMUSP00000048340
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 13 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 13 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0004386 helicase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008186 RNA-dependent ATPase activity
GO:0044822 poly(A) RNA binding
GO:0070063 RNA polymerase binding
Biological Process
GO:0006200 ATP catabolic process
GO:0008150 biological_process
GO:0008152 metabolic process
GO:0034612 response to tumor necrosis factor
GO:0044829 positive regulation by host of viral genome replication
GO:0070555 response to interleukin-1
Cellular Component
GO:0005575 cellular_component
GO:0005783 endoplasmic reticulum
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000047188
View Gene Order
ENSBTAG00000014099
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.244482
RefSeq NM_001163013 XM_006525915
OMIM
CCDS CCDS50278
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca