Mus musculus Gene: Snapc4
Summary
InnateDB Gene IDBG-148599.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Snapc4
Gene Name small nuclear RNA activating complex, polypeptide 4
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000036281
Encoded Proteins
small nuclear RNA activating complex, polypeptide 4
small nuclear RNA activating complex, polypeptide 4
small nuclear RNA activating complex, polypeptide 4
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000165684:
Gene Information
Type Protein coding
Genomic Location Chromosome 2:26362765-26380653
Strand Reverse strand
Band A3
Transcripts
ENSMUST00000035427 ENSMUSP00000041767
ENSMUST00000114115 ENSMUSP00000109750
ENSMUST00000135171
ENSMUST00000149850
ENSMUST00000136054
ENSMUST00000123934 ENSMUSP00000122456
ENSMUST00000149316
ENSMUST00000125789
ENSMUST00000148024
ENSMUST00000150121
ENSMUST00000133778
ENSMUST00000144871
ENSMUST00000124843
ENSMUST00000155643
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 9 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 9 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003682 chromatin binding
Biological Process
GO:0006355 regulation of transcription, DNA-templated
GO:0042795 snRNA transcription from RNA polymerase II promoter
GO:0042796 snRNA transcription from RNA polymerase III promoter
Cellular Component
GO:0019185 snRNA-activating protein complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Not yet available
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Pathways
NETPATH
REACTOME
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
RNA Polymerase III Transcription Initiation pathway
RNA Polymerase III Abortive And Retractive Initiation pathway
Gene Expression pathway
RNA Polymerase III Transcription pathway
RNA Polymerase III Transcription Initiation From Type 3 Promoter pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
RNA Polymerase III Transcription Initiation From Type 3 Promoter pathway
RNA Polymerase III Transcription Initiation pathway
RNA Polymerase III Transcription pathway
RNA Polymerase III Abortive And Retractive Initiation pathway
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
Gene Expression pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt
TrEMBL A2AIV6
UniProt Splice Variant
Entrez Gene 227644
UniGene Mm.207460
RefSeq NM_001290419 XM_006497904 NM_172339 XM_006497905 XM_006497903
OMIM
CCDS CCDS15802
HPRD
IMGT
MGI ID MGI:2443935
MGI Symbol Snapc4
EMBL AL732541
GenPept
RNA Seq Atlas 227644