Homo sapiens Gene: SNAPC4
Summary
InnateDB Gene IDBG-92335.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SNAPC4
Gene Name small nuclear RNA activating complex, polypeptide 4, 190kDa
Synonyms PTFalpha; SNAP190;
Species Homo sapiens
Ensembl Gene ENSG00000165684
Encoded Proteins
small nuclear RNA activating complex, polypeptide 4, 190kDa
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 9:136375577-136398797
Strand Reverse strand
Band q34.3
Transcripts
ENST00000298532 ENSP00000298532
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 14 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 14 [view]
Protein-Protein 14 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003700 sequence-specific DNA binding transcription factor activity
Biological Process
GO:0006355 regulation of transcription, DNA-templated
GO:0006366 transcription from RNA polymerase II promoter
GO:0006383 transcription from RNA polymerase III promoter
GO:0009301 snRNA transcription
GO:0010467 gene expression
GO:0042795 snRNA transcription from RNA polymerase II promoter
GO:0042796 snRNA transcription from RNA polymerase III promoter
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0019185 snRNA-activating protein complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Not yet available
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Pathways
NETPATH
REACTOME
RNA Polymerase III Transcription Initiation From Type 3 Promoter pathway
RNA Polymerase III Transcription Initiation pathway
RNA Polymerase III Transcription pathway
RNA Polymerase III Abortive And Retractive Initiation pathway
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
Gene Expression pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt Q5SXM2
TrEMBL A0A024R8F4
UniProt Splice Variant
Entrez Gene 6621
UniGene Hs.113265
RefSeq NM_003086 XM_005266096 XM_006717241 XM_006717242
HUGO HGNC:11137
OMIM 602777
CCDS CCDS6998
HPRD
IMGT
EMBL AF032387 AL592301 CH471090
GenPept AAC02972 CAI13935 EAW88225 EAW88226 EAW88227
RNA Seq Atlas 6621