Version 5.4
Mus musculus Gene: Vma21
Summary
InnateDB Gene IDBG-150898.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Vma21
Gene Name VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
Synonyms 2610030H06Rik; AI840175
Species Mus musculus
Ensembl Gene ENSMUSG00000073131
Encoded Proteins
IDBP-251481
VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
IDBP-251483
VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
IDBP-251485
VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000160131:
This gene encodes a chaperone for assembly of lysosomal vacuolar ATPase.[provided by RefSeq, Jul 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome X:71815924-71839757
Strand Forward strand
Band A7.3
Transcripts
ENSMUST00000114577 ENSMUSP00000110224
ENSMUST00000114576 ENSMUSP00000110223
ENSMUST00000114575 ENSMUSP00000110222
ENSMUST00000154054
ENSMUST00000138979
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 13 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 13 [view]
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly
Cellular Component
GO:0005789 endoplasmic reticulum membrane
GO:0016021 integral component of membrane
GO:0030127 COPII vesicle coat
GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane
Orthologs
Species
Homo sapiens
Gene ID
Gene Order
ENSG00000160131
View Gene Order
Cross-References
SwissProt Q78T54
TrEMBL F2Z446 F2Z447
UniProt Splice Variant
Entrez Gene 67048
UniGene Mm.371816 Mm.396818 Mm.412314 Mm.412631 Mm.487774
RefSeq NM_001081356 NM_001290780 NM_001290781 XM_006528261 XM_006528262 XM_006528263
OMIM
CCDS CCDS41000 CCDS72388 CCDS72389
HPRD
IMGT
MGI ID MGI:1914298
MGI Symbol Vma21
EMBL AJ748652 AK049296 AK049488 AK138582 AK164163 AL807394 BC028317 BC094639
GenPept AAH28317 AAH94639 BAC33664 BAC33774 BAE23704 BAE37657 CAG38686
RNA Seq Atlas 67048

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca