Version 5.4
Homo sapiens Gene: INTS9
Summary
InnateDB Gene IDBG-15350.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol INTS9
Gene Name integrator complex subunit 9
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000104299
Encoded Proteins
IDBP-365642
integrator complex subunit 9
IDBP-481042
integrator complex subunit 9
IDBP-482430
integrator complex subunit 9
IDBP-473854
integrator complex subunit 9
IDBP-481577
integrator complex subunit 9
IDBP-479767
integrator complex subunit 9
IDBP-480041
integrator complex subunit 9
IDBP-474503
integrator complex subunit 9
IDBP-483083
integrator complex subunit 9
IDBP-484433
integrator complex subunit 9
IDBP-476359
integrator complex subunit 9
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a subunit of the Integrator complex. This protein complex binds the C-terminal domain of RNA polymerase II and likely plays a role in small nuclear RNA processing. The encoded protein has similarities to the subunits of the cleavage and polyadenylation specificity factor complex. Alternatively spliced transcript variants have been described.[provided by RefSeq, Feb 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 8:28767661-28890242
Strand Reverse strand
Band p21.1
Transcripts
ENST00000416984 ENSP00000398208
ENST00000523303 ENSP00000427952
ENST00000521022 ENSP00000429065
ENST00000521777 ENSP00000430943
ENST00000517383 ENSP00000429691
ENST00000522363 ENSP00000430083
ENST00000520316
ENST00000519578
ENST00000520005
ENST00000521070
ENST00000522074
ENST00000520983
ENST00000523436 ENSP00000427789
ENST00000518510 ENSP00000428135
ENST00000524081 ENSP00000429539
ENST00000523076
ENST00000520437 ENSP00000430067
ENST00000520184 ENSP00000429188
ENST00000520831
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 15 experimentally validated interaction(s) in this database.
Experimentally validated
Total 15 [view]
Protein-Protein 14 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0016787 hydrolase activity
Biological Process
GO:0016180 snRNA processing
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0032039 integrator complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000021975
View Gene Order
ENSBTAG00000008845
Not yet available
Cross-References
SwissProt
TrEMBL E5RJ88 E5RK47
UniProt Splice Variant
Entrez Gene 55756
UniGene Hs.162397 Hs.613706
RefSeq NM_001145159 NM_001172562 NM_018250
HUGO HGNC:25592
OMIM 611352
CCDS CCDS34873 CCDS55215 CCDS55216
HPRD 07706
IMGT
EMBL AC040975 AC131969
GenPept
RNA Seq Atlas 55756

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca