Version 5.4
Homo sapiens Gene: PDXDC1
Summary
InnateDB Gene IDBG-15747.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PDXDC1
Gene Name pyridoxal-dependent decarboxylase domain containing 1
Synonyms LP8165
Species Homo sapiens
Ensembl Gene ENSG00000179889
Encoded Proteins
IDBP-15753
pyridoxal-dependent decarboxylase domain containing 1
IDBP-237528
pyridoxal-dependent decarboxylase domain containing 1
IDBP-369385
pyridoxal-dependent decarboxylase domain containing 1
IDBP-369395
pyridoxal-dependent decarboxylase domain containing 1
IDBP-589086
pyridoxal-dependent decarboxylase domain containing 1
IDBP-746383
IDBP-751180
IDBP-750375
IDBP-749934
IDBP-750384
IDBP-750984
IDBP-748969
IDBP-752531
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 16:14974591-15139339
Strand Forward strand
Band p13.11
Transcripts
ENST00000325823 ENSP00000322807
ENST00000396410 ENSP00000379691
ENST00000450288 ENSP00000391147
ENST00000455313 ENSP00000406703
ENST00000535621 ENSP00000437835
ENST00000562119 ENSP00000455486
ENST00000561930
ENST00000563667 ENSP00000455613
ENST00000566633
ENST00000569715 ENSP00000455070
ENST00000563679 ENSP00000454791
ENST00000570001
ENST00000563522 ENSP00000457417
ENST00000565986
ENST00000565362 ENSP00000454279
ENST00000566426 ENSP00000455914
ENST00000567306 ENSP00000454910
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 11 experimentally validated interaction(s) in this database.
Experimentally validated
Total 11 [view]
Protein-Protein 11 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0016831 carboxy-lyase activity
GO:0030170 pyridoxal phosphate binding
Biological Process
GO:0019752 carboxylic acid metabolic process
Cellular Component
GO:0005794 Golgi apparatus
GO:0043231 intracellular membrane-bounded organelle
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000022680
View Gene Order
ENSBTAG00000004801
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.370781
RefSeq NM_001285444 NM_001285445 NM_001285447 NM_001285448 NM_001285449 NM_001285450 NM_015027 XM_005255174 XM_005255176
HUGO
OMIM
CCDS CCDS32393 CCDS66954 CCDS66957 CCDS73830 CCDS73831
HPRD 13789
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca