Version 5.4
Mus musculus Gene: Otud4
Summary
InnateDB Gene IDBG-170601.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Otud4
Gene Name OTU domain containing 4
Synonyms 4930431L18Rik; AI449692; D8Ertd69e; mKIAA1046
Species Mus musculus
Ensembl Gene ENSMUSG00000036990
Encoded Proteins
IDBP-620794
OTU domain containing 4
IDBP-620796
OTU domain containing 4
IDBP-620797
OTU domain containing 4
IDBP-620798
OTU domain containing 4
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000164164:
Alternatively spliced transcript variants have been found for this gene. The smaller protein isoform encoded by the shorter transcript variant is found only in HIV-1 infected cells. [provided by RefSeq, Jul 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 8:79639618-79677724
Strand Forward strand
Band C1
Transcripts
ENSMUST00000173078 ENSMUSP00000133939
ENSMUST00000173286 ENSMUSP00000134097
ENSMUST00000173300
ENSMUST00000173868
ENSMUST00000174485 ENSMUSP00000133746
ENSMUST00000172614 ENSMUSP00000133777
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 30 interaction(s) predicted by orthology.
Predicted by orthology
Total 30 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004843 ubiquitin-specific protease activity
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006508 proteolysis
GO:0071108 protein K48-linked deubiquitination
Cellular Component
GO:0005575 cellular_component
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000164164
View Gene Order
ENSBTAG00000019857
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.34348 Mm.466250
RefSeq NM_001081164 NM_001256033 XM_006531406
OMIM
CCDS CCDS57625 CCDS57626
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca