Version 5.4
Mus musculus Gene: Pogz
Summary
InnateDB Gene IDBG-170786.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Pogz
Gene Name pogo transposable element with ZNF domain
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000038902
Encoded Proteins
IDBP-170788
pogo transposable element with ZNF domain
IDBP-267034
pogo transposable element with ZNF domain
IDBP-267036
pogo transposable element with ZNF domain
IDBP-267038
pogo transposable element with ZNF domain
IDBP-534565
pogo transposable element with ZNF domain
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000143442:
The protein encoded by this gene appears to be a zinc finger protein containing a transposase domain at the C-terminus. This protein was found to interact with the transcription factor SP1 in a yeast two-hybrid system. Alternatively spliced transcript variants encoding distinct isoforms have been observed. [provided by RefSeq, Aug 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:94837567-94882326
Strand Forward strand
Band F2.1
Transcripts
ENSMUST00000042402 ENSMUSP00000037523
ENSMUST00000107270 ENSMUSP00000102891
ENSMUST00000107269 ENSMUSP00000102890
ENSMUST00000107266 ENSMUSP00000102887
ENSMUST00000107265
ENSMUST00000126235
ENSMUST00000132544
ENSMUST00000140397 ENSMUSP00000122492
ENSMUST00000125638
ENSMUST00000142253
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 20 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 20 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0007064 mitotic sister chromatid cohesion
GO:0051382 kinetochore assembly
Cellular Component
GO:0000790 nuclear chromatin
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000143442
View Gene Order
ENSBTAG00000021289
Not yet available
Cross-References
SwissProt Q8BZH4
TrEMBL B9EIG6 D3YUW8 D3YUX1 Q0VGT3
UniProt Splice Variant
Entrez Gene 229584
UniGene Mm.274787 Mm.394743 Mm.417483
RefSeq NM_001165948 NM_172683 XM_006501362
OMIM
CCDS CCDS17596 CCDS50985
HPRD
IMGT
MGI ID MGI:2442117
MGI Symbol Pogz
EMBL AC087062 AC087903 AK030880 AK035255 AK122288 BC032176 BC085188 BC096492 BC139432 BC139433 CH466620
GenPept AAH32176 AAH85188 AAH96492 AAI39433 AAI39434 BAC27169 BAC29003 BAC65570 EDL38752 EDL38753
RNA Seq Atlas 229584

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca