Version 5.4
Bos taurus Gene: BT.28081
Summary
InnateDB Gene IDBG-633091.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol BT.28081
Gene Name pogo transposable element with ZNF domain
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000021289
Encoded Proteins
IDBP-684777
pogo transposable element with ZNF domain
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000143442:
The protein encoded by this gene appears to be a zinc finger protein containing a transposase domain at the C-terminus. This protein was found to interact with the transcription factor SP1 in a yeast two-hybrid system. Alternatively spliced transcript variants encoding distinct isoforms have been observed. [provided by RefSeq, Aug 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:19361111-19410845
Strand Forward strand
Band
Transcripts
ENSBTAT00000033883 ENSBTAP00000033789
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 20 interaction(s) predicted by orthology.
Predicted by orthology
Total 20 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0007064 mitotic sister chromatid cohesion
GO:0051382 kinetochore assembly
Cellular Component
GO:0000790 nuclear chromatin
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000143442
View Gene Order
ENSMUSG00000038902
View Gene Order
Cross-References
SwissProt
TrEMBL E1BPS7
UniProt Splice Variant
Entrez Gene 535254
UniGene Bt.28081
RefSeq NM_001163190 XM_005203918
HUGO HGNC:18801
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02007247 DAAA02007248 DAAA02007249 DAAA02007250
GenPept
RNA Seq Atlas 535254

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca