Version 5.4
Mus musculus Gene: Ltn1
Summary
InnateDB Gene IDBG-173339.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ltn1
Gene Name listerin E3 ubiquitin protein ligase 1
Synonyms 4930528H02Rik; AV266914; C87237; Listerin; Rnf160; Zfp294
Species Mus musculus
Ensembl Gene ENSMUSG00000052299
Encoded Proteins
IDBP-173341
listerin E3 ubiquitin protein ligase 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000198862:
Like most RING finger proteins, LTN1 functions as an E3 ubiquitin ligase (Chu et al., 2009 [PubMed 19196968]).[supplied by OMIM, Nov 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 16:87376651-87432606
Strand Reverse strand
Band C3.3
Transcripts
ENSMUST00000039449 ENSMUSP00000038775
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 10 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 10 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004842 ubiquitin-protein transferase activity
GO:0005488 binding
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0016874 ligase activity
GO:0046872 metal ion binding
Biological Process
GO:0008219 cell death
GO:0051865 protein autoubiquitination
Cellular Component
GO:0005575 cellular_component
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000198862
View Gene Order
ENSBTAG00000000201
Not yet available
Cross-References
SwissProt Q6A009
TrEMBL Q0P617
UniProt Splice Variant
Entrez Gene 78913
UniGene Mm.249005
RefSeq NM_001081068 XM_006523111
OMIM
CCDS CCDS37382
HPRD
IMGT
MGI ID MGI:1926163
MGI Symbol Ltn1
EMBL AC140319 AK036725 AK173009 BC027795 BC039795
GenPept AAH27795 AAH39795 BAC29552 BAD32287
RNA Seq Atlas 78913

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca