Version 5.4
Mus musculus Gene: Hmbox1
Summary
InnateDB Gene IDBG-173764.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Hmbox1
Gene Name homeobox containing 1
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000021972
Encoded Proteins
IDBP-173766
homeobox containing 1
IDBP-173768
homeobox containing 1
IDBP-718371
IDBP-718321
IDBP-717959
IDBP-716202
IDBP-715846
IDBP-718171
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000147421:
Gene Information
Type Protein coding
Genomic Location Chromosome 14:64811600-64949871
Strand Reverse strand
Band D1
Transcripts
ENSMUST00000022544 ENSMUSP00000022544
ENSMUST00000067843 ENSMUSP00000066905
ENSMUST00000175905 ENSMUSP00000135657
ENSMUST00000176489 ENSMUSP00000134824
ENSMUST00000176657
ENSMUST00000176128 ENSMUSP00000135448
ENSMUST00000176832 ENSMUSP00000135211
ENSMUST00000177326 ENSMUSP00000135372
ENSMUST00000175744 ENSMUSP00000135272
ENSMUST00000176386
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0045892 negative regulation of transcription, DNA-templated
GO:0045893 positive regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000147421
View Gene Order
ENSBTAG00000010819
Not yet available
Cross-References
SwissProt
TrEMBL H3BK13
UniProt Splice Variant
Entrez Gene 219150
UniGene Mm.344074
RefSeq NM_177338 XM_006518882 XM_006518883 XM_006518884 XM_006518885 XM_006518886 XM_006518888 XM_006518890 XM_006518891 XM_006518892 XM_006518894
OMIM
CCDS CCDS36955
HPRD
IMGT
MGI ID MGI:2445066
MGI Symbol Hmbox1
EMBL AC132602 AC141425
GenPept
RNA Seq Atlas 219150

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca