Version 5.4
| Mus musculus Gene: Znrd1 | |||||||||
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| Summary | |||||||||
| InnateDB Gene | IDBG-181941.6 | ||||||||
| Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||
| Gene Symbol | Znrd1 | ||||||||
| Gene Name | zinc ribbon domain containing, 1 | ||||||||
| Synonyms | 1110014N07Rik; Rpa12 | ||||||||
| Species | Mus musculus | ||||||||
| Ensembl Gene | ENSMUSG00000036315 | ||||||||
| Encoded Proteins |
zinc ribbon domain containing, 1
zinc ribbon domain containing, 1
zinc ribbon domain containing, 1
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| Protein Structure | |||||||||
| Useful resources | Stemformatics EHFPI ImmGen | ||||||||
| Entrez Gene | |||||||||
| Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000066379:
This gene encodes a protein with similarity to the Saccharomyces cerevisiae Rpa12p subunit of RNA polymerase I. Alternate splicing of this gene results in two transcript variants encoding the same protein. Additional splice variants have been described, but their full-length sequences have not been determined. [provided by RefSeq, Jul 2008] |
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| Gene Information | |||||||||
| Type | Protein coding | ||||||||
| Genomic Location | Chromosome 17:36954356-36958559 | ||||||||
| Strand | Reverse strand | ||||||||
| Band | B1 | ||||||||
| Transcripts |
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| Interactions | |||||||||
| Number of Interactions |
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 15 interaction(s) predicted by orthology.
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| Gene Ontology | |||||||||
Molecular Function |
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| Biological Process |
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| Cellular Component |
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| Orthologs | |||||||||
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Species
Homo sapiens
Bos taurus
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Gene ID
Gene Order
Not yet available
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| Pathways | |||||||||
| NETPATH | |||||||||
| REACTOME |
RNA Polymerase I Transcription pathway
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
Mus musculus biological processes pathway
NoRC negatively regulates rRNA expression pathway
RNA Polymerase I Transcription Termination pathway
NoRC negatively regulates rRNA expression pathway
Epigenetic regulation of gene expression pathway
Gene Expression pathway
Negative epigenetic regulation of rRNA expression pathway
RNA Polymerase I Promoter Escape pathway
RNA Polymerase I Promoter Clearance pathway
RNA Polymerase I Chain Elongation pathway
RNA Polymerase I Transcription Initiation pathway
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| KEGG |
Pyrimidine metabolism pathway
RNA polymerase pathway
Purine metabolism pathway
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| INOH | |||||||||
| PID NCI | |||||||||
| Pathway Predictions based on Human Orthology Data | |||||||||
| NETPATH | |||||||||
| REACTOME |
RNA Polymerase I Transcription Termination pathway
RNA Polymerase I Chain Elongation pathway
RNA Polymerase I Promoter Escape pathway
RNA Polymerase I Transcription Initiation pathway
RNA Polymerase I Transcription pathway
Epigenetic regulation of gene expression pathway
RNA Polymerase I Promoter Clearance pathway
NoRC negatively regulates rRNA expression pathway
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
Gene Expression pathway
Negative epigenetic regulation of rRNA expression pathway
RNA Polymerase I Transcription Termination pathway
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
RNA Polymerase I Promoter Escape pathway
RNA Polymerase I Transcription pathway
Gene Expression pathway
RNA Polymerase I Chain Elongation pathway
RNA Polymerase I Transcription Initiation pathway
RNA Polymerase I Promoter Clearance pathway
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| KEGG |
Pyrimidine metabolism pathway
Purine metabolism pathway
RNA polymerase pathway
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| INOH | |||||||||
| PID NCI | |||||||||
| Cross-References | |||||||||
| SwissProt | |||||||||
| TrEMBL | |||||||||
| UniProt Splice Variant | |||||||||
| Entrez Gene | |||||||||
| UniGene | |||||||||
| RefSeq | NM_023162 XM_006524792 XM_006536683 XM_006536850 XM_006537414 | ||||||||
| OMIM | |||||||||
| CCDS | CCDS28730 | ||||||||
| HPRD | |||||||||
| IMGT | |||||||||
| MGI ID | |||||||||
| MGI Symbol | |||||||||
| EMBL | |||||||||
| GenPept | |||||||||
| RNA Seq Atlas | |||||||||