Mus musculus Gene: Specc1
Summary
InnateDB Gene IDBG-183953.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Specc1
Gene Name sperm antigen with calponin homology and coiled-coil domains 1
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000042331
Encoded Proteins
sperm antigen with calponin homology and coiled-coil domains 1
sperm antigen with calponin homology and coiled-coil domains 1
sperm antigen with calponin homology and coiled-coil domains 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000128487:
The protein encoded by this gene belongs to the cytospin-A family. It is localized in the nucleus, and highly expressed in testis and some cancer cell lines. A chromosomal translocation involving this gene and platelet-derived growth factor receptor, beta gene (PDGFRB) may be a cause of juvenile myelomonocytic leukemia. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Aug 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 11:61956779-62223013
Strand Forward strand
Band B2
Transcripts
ENSMUST00000049836 ENSMUSP00000063102
ENSMUST00000092415 ENSMUSP00000090071
ENSMUST00000108709 ENSMUSP00000104349
ENSMUST00000136971
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0007155 cell adhesion
GO:0008150 biological_process
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Not yet available
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Cross-References
SwissProt Q5SXY1
TrEMBL
UniProt Splice Variant
Entrez Gene 432572
UniGene Mm.338519 Mm.396891 Mm.438022 Mm.459461
RefSeq NM_001029936
OMIM
CCDS
HPRD
IMGT
MGI ID MGI:2442356
MGI Symbol Specc1
EMBL AK046469 AK050982 AK220465 AL592080 AL596110
GenPept BAC32744 BAC34484 BAD90492 CAI23916 CAI23917 CAI35329
RNA Seq Atlas 432572