Version 5.4
Mus musculus Gene: Ddx55
Summary
InnateDB Gene IDBG-200752.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ddx55
Gene Name DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Synonyms 2810021H22Rik; mKIAA1595
Species Mus musculus
Ensembl Gene ENSMUSG00000029389
Encoded Proteins
IDBP-200754
DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
IDBP-258104
DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000111364:
This gene encodes a member of the DEAD box protein family. DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure, such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. Multiple alternatively spliced transcript variants have been found for this gene, but the biological validity of only one transcript has been confirmed. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:124552864-124569660
Strand Forward strand
Band F
Transcripts
ENSMUST00000071057 ENSMUSP00000070279
ENSMUST00000111438 ENSMUSP00000107065
ENSMUST00000131631
ENSMUST00000136067
ENSMUST00000144433
ENSMUST00000142451
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0008026 ATP-dependent helicase activity
GO:0016787 hydrolase activity
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006200 ATP catabolic process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
GO:0016020 membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000111364
View Gene Order
ENSBTAG00000007266
Not yet available
Cross-References
SwissProt Q6ZPL9
TrEMBL
UniProt Splice Variant
Entrez Gene 67848
UniGene Mm.281601 Mm.439554
RefSeq NM_026409 NM_001190795
OMIM
CCDS CCDS39281 CCDS57380
HPRD
IMGT
MGI ID MGI:1915098
MGI Symbol Ddx55
EMBL AK033741 AK129402 AK154422 BC117786 BC117787
GenPept AAI17787 AAI17788 BAC28459 BAC98212 BAE32574
RNA Seq Atlas 67848

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca