Version 5.4
Mus musculus Gene: Atg16l2
Summary
InnateDB Gene IDBG-201840.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Atg16l2
Gene Name autophagy related 16-like 2 (S. cerevisiae)
Synonyms 2410118P20Rik
Species Mus musculus
Ensembl Gene ENSMUSG00000047767
Encoded Proteins
IDBP-400387
autophagy related 16 like 2 (S. cerevisiae)
IDBP-400390
autophagy related 16 like 2 (S. cerevisiae)
IDBP-538732
autophagy related 16 like 2 (S. cerevisiae)
IDBP-533929
autophagy related 16 like 2 (S. cerevisiae)
IDBP-539046
autophagy related 16 like 2 (S. cerevisiae)
IDBP-534170
autophagy related 16 like 2 (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000168010:
Gene Information
Type Protein coding
Genomic Location Chromosome 7:101289392-101302251
Strand Reverse strand
Band E2
Transcripts
ENSMUST00000120267 ENSMUSP00000112500
ENSMUST00000122116 ENSMUSP00000113320
ENSMUST00000143630 ENSMUSP00000117029
ENSMUST00000124617
ENSMUST00000139609 ENSMUSP00000117387
ENSMUST00000131988
ENSMUST00000123970
ENSMUST00000134531
ENSMUST00000153327
ENSMUST00000151297
ENSMUST00000140059 ENSMUSP00000119734
ENSMUST00000146445
ENSMUST00000123835
ENSMUST00000140553 ENSMUSP00000116414
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0006914 autophagy
GO:0015031 protein transport
GO:0039689 negative stranded viral RNA replication
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000168010
View Gene Order
ENSBTAG00000019059
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu04140
Regulation of autophagy pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa04140
Regulation of autophagy pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_001111111 XM_006508226
OMIM
CCDS CCDS52329
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca