Version 5.4
Homo sapiens Gene: ATG16L2
Summary
InnateDB Gene IDBG-63662.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ATG16L2
Gene Name autophagy related 16-like 2 (S. cerevisiae)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000168010
Encoded Proteins
IDBP-63664
ATG16 autophagy related 16-like 2 (S. cerevisiae)
IDBP-380598
ATG16 autophagy related 16-like 2 (S. cerevisiae)
IDBP-587654
ATG16 autophagy related 16-like 2 (S. cerevisiae)
IDBP-602695
ATG16 autophagy related 16-like 2 (S. cerevisiae)
IDBP-589880
ATG16 autophagy related 16-like 2 (S. cerevisiae)
IDBP-597957
ATG16 autophagy related 16-like 2 (S. cerevisiae)
IDBP-590866
ATG16 autophagy related 16-like 2 (S. cerevisiae)
IDBP-602163
ATG16 autophagy related 16-like 2 (S. cerevisiae)
IDBP-594864
ATG16 autophagy related 16-like 2 (S. cerevisiae)
IDBP-599923
ATG16 autophagy related 16-like 2 (S. cerevisiae)
IDBP-585508
ATG16 autophagy related 16-like 2 (S. cerevisiae)
IDBP-593703
ATG16 autophagy related 16-like 2 (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 11:72814308-72843674
Strand Forward strand
Band q13.4
Transcripts
ENST00000321297 ENSP00000326340
ENST00000451353
ENST00000435507 ENSP00000400705
ENST00000439504
ENST00000534905 ENSP00000441189
ENST00000537143
ENST00000542908
ENST00000544490 ENSP00000442635
ENST00000540567 ENSP00000443569
ENST00000538842
ENST00000536995
ENST00000537212
ENST00000541999 ENSP00000442931
ENST00000535830 ENSP00000438474
ENST00000538973 ENSP00000441989
ENST00000541367 ENSP00000437412
ENST00000545248
ENST00000540222 ENSP00000441747
ENST00000537837 ENSP00000437932
ENST00000541554 ENSP00000441132
ENST00000542481
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0006914 autophagy
GO:0015031 protein transport
GO:0039689 negative stranded viral RNA replication
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000047767
View Gene Order
ENSBTAG00000019059
Not yet available
Pathways
NETPATH
REACTOME
KEGG
hsa04140
Regulation of autophagy pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.653186
RefSeq NM_033388 XM_005274376 XM_005274378 XM_006718732
HUGO
OMIM
CCDS CCDS31634
HPRD 10959
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca