Mus musculus Gene: Trim6
Summary
InnateDB Gene IDBG-204056.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Trim6
Gene Name tripartite motif-containing 6
Synonyms C430046K18Rik; D7Ertd684e;
Species Mus musculus
Ensembl Gene ENSMUSG00000072244
Encoded Proteins
tripartite motif-containing 6
tripartite motif-containing 6
tripartite motif-containing 6
tripartite motif-containing 6
tripartite motif-containing 6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
InnateDB Annotation from Orthologs
Summary
[Homo sapiens] TRIM6 was identified in a systematic screen for positive regulators of innate immune responses.
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000121236:
The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, B-box type 1 and B-box type 2 domain, and a coiled-coil region. The protein localizes to the nucleus, but its specific function has not been identified. This gene is mapped to chromosome 11p15, where it resides within a TRIM gene cluster. Alternative splicing results in multiple transcript variants. A read-through transcript from this gene into the downstream TRIM34 gene has also been observed, which results in a fusion product from these neighboring family members. [provided by RefSeq, Oct 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 7:104218793-104235152
Strand Forward strand
Band E3
Transcripts
ENSMUST00000098180 ENSMUSP00000095782
ENSMUST00000097023 ENSMUSP00000094787
ENSMUST00000144538
ENSMUST00000144455 ENSMUSP00000116233
ENSMUST00000128493 ENSMUSP00000118859
ENSMUST00000153324 ENSMUSP00000119932
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0070206 protein trimerization
Cellular Component
GO:0005622 intracellular
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Gene ID
Gene Order
Method
Confidence
Comments
Low
Tentative data, uncurated. RBBH derived.
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.274843
RefSeq NM_001013616 XM_006508364 XM_006508365 XM_006508366
OMIM
CCDS CCDS40065
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas