Version 5.4
Mus musculus Gene: Trmt6
Summary
InnateDB Gene IDBG-207486.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Trmt6
Gene Name tRNA methyltransferase 6 homolog (S. cerevisiae)
Synonyms 3300001M20Rik; AU016412; AW492787; CGI-09; mKIAA1153
Species Mus musculus
Ensembl Gene ENSMUSG00000037376
Encoded Proteins
IDBP-207488
tRNA methyltransferase 6 homolog (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000089195:
The protein encoded by this gene is similar to an uncharacterized protein from C. elegans. Although the function of the encoded protein is unknown, it shares weak sequence similarity to a region of S. cerevisiae translation initiation factor subunit Gcd10p. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:132804207-132816055
Strand Reverse strand
Band F2
Transcripts
ENSMUST00000039554 ENSMUSP00000044687
ENSMUST00000147336
ENSMUST00000152836
ENSMUST00000145117
ENSMUST00000136897
ENSMUST00000127855
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 9 interaction(s) predicted by orthology.
Predicted by orthology
Total 9 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003743 translation initiation factor activity
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006413 translational initiation
GO:0006446 regulation of translational initiation
GO:0008033 tRNA processing
Cellular Component
GO:0005575 cellular_component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000089195
View Gene Order
ENSBTAG00000001314
Not yet available
Cross-References
SwissProt Q8CE96
TrEMBL
UniProt Splice Variant
Entrez Gene 66926
UniGene Mm.34199 Mm.468313
RefSeq NM_175113 XM_006500051
OMIM
CCDS CCDS50728
HPRD
IMGT
MGI ID MGI:1914176
MGI Symbol Trmt6
EMBL AK014359 AK028755 AK129300 AK165976 AK167222 BC049083 BC052648
GenPept AAH49083 AAH52648 BAC25432 BAC26100 BAC98110 BAE38495 BAE39347
RNA Seq Atlas 66926

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca