Version 5.4
| Mus musculus Gene: Col9a3 | |||||||||||||
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| Summary | |||||||||||||
| InnateDB Gene | IDBG-213859.6 | ||||||||||||
| Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||||||
| Gene Symbol | Col9a3 | ||||||||||||
| Gene Name | collagen, type IX, alpha 3 | ||||||||||||
| Synonyms | AV006866 | ||||||||||||
| Species | Mus musculus | ||||||||||||
| Ensembl Gene | ENSMUSG00000027570 | ||||||||||||
| Encoded Proteins |
collagen, type IX, alpha 3
collagen, type IX, alpha 3
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| Protein Structure | |||||||||||||
| Useful resources | Stemformatics EHFPI ImmGen | ||||||||||||
| Entrez Gene | |||||||||||||
| Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000092758:
This gene encodes one of the three alpha chains of type IX collagen, the major collagen component of hyaline cartilage. Type IX collagen, a heterotrimeric molecule, is usually found in tissues containing type II collagen, a fibrillar collagen. Mutations in this gene are associated with multiple epiphyseal dysplasia type 3. [provided by RefSeq, Jan 2010] |
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| Gene Information | |||||||||||||
| Type | Protein coding | ||||||||||||
| Genomic Location | Chromosome 2:180597790-180622189 | ||||||||||||
| Strand | Forward strand | ||||||||||||
| Band | H4 | ||||||||||||
| Transcripts |
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| Interactions | |||||||||||||
| Number of Interactions |
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
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| Gene Ontology | |||||||||||||
Molecular Function |
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| Biological Process |
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| Cellular Component |
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| Orthologs | |||||||||||||
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Species
Homo sapiens
Bos taurus
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Gene ID
Gene Order
Not yet available
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| Pathways | |||||||||||||
| NETPATH | |||||||||||||
| REACTOME | |||||||||||||
| KEGG |
Protein digestion and absorption pathway
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| INOH | |||||||||||||
| PID NCI | |||||||||||||
| Pathway Predictions based on Human Orthology Data | |||||||||||||
| NETPATH | |||||||||||||
| REACTOME |
Integrin cell surface interactions pathway
Signaling by PDGF pathway
Collagen biosynthesis and modifying enzymes pathway
Collagen degradation pathway
NCAM1 interactions pathway
NCAM signaling for neurite out-growth pathway
Developmental Biology pathway
Extracellular matrix organization pathway
Degradation of the extracellular matrix pathway
Axon guidance pathway
Signal Transduction pathway
ECM proteoglycans pathway
Collagen formation pathway
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| KEGG |
Protein digestion and absorption pathway
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| INOH |
Integrin signaling pathway pathway
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| PID NCI | |||||||||||||
| Cross-References | |||||||||||||
| SwissProt | |||||||||||||
| TrEMBL | A2ACT7 Q8K2L1 Q8VHY3 Q9CTK5 Q9JKK4 | ||||||||||||
| UniProt Splice Variant | |||||||||||||
| Entrez Gene | 12841 | ||||||||||||
| UniGene | Mm.141312 | ||||||||||||
| RefSeq | NM_009936 XM_006500552 | ||||||||||||
| OMIM | |||||||||||||
| CCDS | CCDS17180 | ||||||||||||
| HPRD | |||||||||||||
| IMGT | |||||||||||||
| MGI ID | MGI:894686 | ||||||||||||
| MGI Symbol | Col9a3 | ||||||||||||
| EMBL | AF237721 AF349718 AK003258 AL669926 BC030945 CH466626 | ||||||||||||
| GenPept | AAF67684 AAH30945 AAL56219 BAB22674 EDL07344 | ||||||||||||
| RNA Seq Atlas | 12841 | ||||||||||||