Version 5.4
Homo sapiens Gene: RUFY3
Summary
InnateDB Gene IDBG-22683.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RUFY3
Gene Name RUN and FYVE domain containing 3
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000018189
Encoded Proteins
IDBP-22685
RUN and FYVE domain containing 3
IDBP-22687
RUN and FYVE domain containing 3
IDBP-369857
RUN and FYVE domain containing 3
IDBP-477590
RUN and FYVE domain containing 3
IDBP-474218
RUN and FYVE domain containing 3
IDBP-483064
RUN and FYVE domain containing 3
IDBP-485418
RUN and FYVE domain containing 3
IDBP-479985
RUN and FYVE domain containing 3
IDBP-479962
RUN and FYVE domain containing 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 4:70704204-70807315
Strand Forward strand
Band q13.3
Transcripts
ENST00000226328 ENSP00000226328
ENST00000381006 ENSP00000370394
ENST00000417478 ENSP00000399771
ENST00000514898 ENSP00000426165
ENST00000503876 ENSP00000426734
ENST00000513597 ENSP00000425574
ENST00000502653 ENSP00000425400
ENST00000504805 ENSP00000421120
ENST00000512103 ENSP00000420980
ENST00000507333
ENST00000503025
ENST00000512331
ENST00000515479
ENST00000515442
ENST00000513593
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0050771 negative regulation of axonogenesis
Cellular Component
GO:0030175 filopodium
GO:0030426 growth cone
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000029291
View Gene Order
ENSBTAG00000016795
Not yet available
Cross-References
SwissProt Q7L099
TrEMBL D6RCQ1 D6REM9 D6RH24
UniProt Splice Variant
Entrez Gene 22902
UniGene Hs.596505 Hs.596820 Hs.644801 Hs.739750 Hs.7972
RefSeq NM_001130709 NM_001037442 NM_001291993 NM_014961 XM_005265657
HUGO HGNC:30285
OMIM 611194
CCDS CCDS47068 CCDS34001 CCDS3547 CCDS75138
HPRD 15251
IMGT
EMBL AB020678 AC009570 AF112221 AK000911 AK302637 BC051716
GenPept AAF17208 AAH51716 BAA74894 BAG50837 BAG63879
RNA Seq Atlas 22902

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca