Version 5.4
Homo sapiens Gene: UBP1
Summary
InnateDB Gene IDBG-24132.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol UBP1
Gene Name upstream binding protein 1 (LBP-1a)
Synonyms LBP-1a; LBP-1B; LBP1A; LBP1B
Species Homo sapiens
Ensembl Gene ENSG00000153560
Encoded Proteins
IDBP-24134
upstream binding protein 1 (LBP-1a)
IDBP-24136
upstream binding protein 1 (LBP-1a)
IDBP-370172
upstream binding protein 1 (LBP-1a)
IDBP-370190
upstream binding protein 1 (LBP-1a)
IDBP-370197
upstream binding protein 1 (LBP-1a)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 3:33388336-33441371
Strand Reverse strand
Band p22.3
Transcripts
ENST00000283629 ENSP00000283629
ENST00000283628 ENSP00000283628
ENST00000447368 ENSP00000395558
ENST00000411650 ENSP00000393842
ENST00000456378 ENSP00000401614
ENST00000492136
ENST00000466441
ENST00000486388
ENST00000464787
ENST00000490112
ENST00000467613
ENST00000481761
ENST00000496310
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 11 experimentally validated interaction(s) in this database.
They are also associated with 8 interaction(s) predicted by orthology.
Experimentally validated
Total 11 [view]
Protein-Protein 9 [view]
Protein-DNA 2 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 8 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0003714 transcription corepressor activity
Biological Process
GO:0001525 angiogenesis
GO:0006351 transcription, DNA-templated
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0019079 viral genome replication
GO:0045892 negative regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000009741
View Gene Order
ENSBTAG00000003968
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.729120
RefSeq NM_001128160 NM_001128161 NM_014517 XM_006713322
HUGO
OMIM
CCDS CCDS2659 CCDS46788
HPRD 10291
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca