Version 5.4
Homo sapiens Gene: HMG20A
Summary
InnateDB Gene IDBG-24311.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol HMG20A
Gene Name high mobility group 20A
Synonyms HMGX1; HMGXB1
Species Homo sapiens
Ensembl Gene ENSG00000140382
Encoded Proteins
IDBP-24313
high mobility group 20A
IDBP-37690
high mobility group 20A
IDBP-603182
high mobility group 20A
IDBP-596483
high mobility group 20A
IDBP-593335
high mobility group 20A
IDBP-602594
high mobility group 20A
IDBP-598670
high mobility group 20A
IDBP-600316
high mobility group 20A
IDBP-588103
high mobility group 20A
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 15:77420412-77485607
Strand Forward strand
Band q24.3
Transcripts
ENST00000336216 ENSP00000336856
ENST00000381714 ENSP00000371133
ENST00000560498 ENSP00000453498
ENST00000558651 ENSP00000453727
ENST00000559035 ENSP00000453592
ENST00000558176 ENSP00000452665
ENST00000560986
ENST00000559099 ENSP00000454136
ENST00000560867 ENSP00000452864
ENST00000559728
ENST00000558845 ENSP00000452847
ENST00000558288
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 27 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 27 [view]
Protein-Protein 24 [view]
Protein-DNA 2 [view]
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0046982 protein heterodimerization activity
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0006325 chromatin organization
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0016568 chromatin modification
GO:0045665 negative regulation of neuron differentiation
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000032329
View Gene Order
ENSBTAG00000020441
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.69594 Hs.737244
RefSeq NM_018200 XM_005254123
HUGO
OMIM
CCDS CCDS10295
HPRD 16116
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca