Version 5.4
Homo sapiens Gene: WDR48
Summary
InnateDB Gene IDBG-26453.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol WDR48
Gene Name WD repeat domain 48
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000114742
Encoded Proteins
IDBP-26455
WD repeat domain 48
IDBP-372542
WD repeat domain 48
IDBP-372592
WD repeat domain 48
IDBP-372596
WD repeat domain 48
IDBP-372599
WD repeat domain 48
IDBP-372601
WD repeat domain 48
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 3:39051998-39096671
Strand Forward strand
Band p22.2
Transcripts
ENST00000302313 ENSP00000307491
ENST00000423296 ENSP00000401421
ENST00000413099 ENSP00000388720
ENST00000433841 ENSP00000406025
ENST00000420940 ENSP00000415963
ENST00000441361 ENSP00000416900
ENST00000489838
ENST00000463198
ENST00000477197
ENST00000466405
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 79 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 79 [view]
Protein-Protein 79 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0000724 double-strand break repair via homologous recombination
GO:0006974 cellular response to DNA damage stimulus
GO:0007283 spermatogenesis
GO:0007338 single fertilization
GO:0008584 male gonad development
GO:0016032 viral process
GO:0016579 protein deubiquitination
GO:0035264 multicellular organism growth
GO:0043588 skin development
GO:0048568 embryonic organ development
GO:0048705 skeletal system morphogenesis
GO:0048872 homeostasis of number of cells
GO:0050679 positive regulation of epithelial cell proliferation
GO:0072520 seminiferous tubule development
GO:1902525 regulation of protein monoubiquitination
Cellular Component
GO:0005634 nucleus
GO:0005764 lysosome
GO:0043231 intracellular membrane-bounded organelle
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000032512
View Gene Order
ENSBTAG00000003745
Not yet available
Pathways
NETPATH
REACTOME
KEGG
INOH
PID NCI
fanconi_pathway
Fanconi anemia pathway
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.109778 Hs.733733
RefSeq NM_020839
HUGO
OMIM
CCDS CCDS33738
HPRD 11146
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca