Version 5.4
Homo sapiens Gene: SNX20
Summary
InnateDB Gene IDBG-30620.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SNX20
Gene Name sorting nexin 20
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000167208
Encoded Proteins
IDBP-30622
sorting nexin 20
IDBP-30624
sorting nexin 20
IDBP-376837
sorting nexin 20
IDBP-753349
IDBP-811098
sorting nexin 20
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary SNX20 interacts with the cytoplasmic domain of PSGL1 (SELPLG; MIM 600738) and cycles PSGL1 into endosomes.[supplied by OMIM, Feb 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 16:50666300-50681353
Strand Reverse strand
Band q12.1
Transcripts
ENST00000300590 ENSP00000300590
ENST00000330943 ENSP00000332062
ENST00000423026 ENSP00000388875
ENST00000568993 ENSP00000454863
ENST00000610485 ENSP00000484863
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0035091 phosphatidylinositol binding
Biological Process
GO:0015031 protein transport
Cellular Component
GO:0005634 nucleus
GO:0005886 plasma membrane
GO:0010008 endosome membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000031662
View Gene Order
ENSBTAG00000003961
Not yet available
Cross-References
SwissProt Q7Z614
TrEMBL
UniProt Splice Variant
Entrez Gene 124460
UniGene Hs.660456 Hs.715778
RefSeq NM_182854 NM_001144972 NM_153337
HUGO HGNC:30390
OMIM 613281
CCDS CCDS10745 CCDS10744 CCDS45481
HPRD 15401
IMGT
EMBL AK292650 AK292705 AY302441 BC063423 BC119626 CH471092
GenPept AAH63423 AAI19627 AAP58362 BAF85339 BAF85394 EAW82763
RNA Seq Atlas 124460

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca