Version 5.4
Homo sapiens Gene: THSD1
Summary
InnateDB Gene IDBG-35234.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol THSD1
Gene Name thrombospondin, type I, domain containing 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000136114
Encoded Proteins
IDBP-35238
thrombospondin, type I, domain containing 1
IDBP-35240
thrombospondin, type I, domain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary The protein encoded by this gene contains a type 1 thrombospondin domain, which is found in a number of proteins involved in the complement pathway, as well as in extracellular matrix proteins. Alternatively spliced transcript variants encoding different isoforms have been observed for this gene. [provided by RefSeq, Jan 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 13:52377167-52406494
Strand Reverse strand
Band q14.3
Transcripts
ENST00000349258 ENSP00000340650
ENST00000258613 ENSP00000258613
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0002244 hematopoietic progenitor cell differentiation
Cellular Component
GO:0005576 extracellular region
GO:0005737 cytoplasm
GO:0009986 cell surface
GO:0016021 integral component of membrane
GO:0071944 cell periphery
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
ENSMUSG00000031480
View Gene Order
Ortholuge
SSD Ortholog
Ortholog supports species divergence
ENSBTAG00000020374
Not yet available
Ortholuge
SSD Ortholog
Ortholog supports species divergence
Pathways
NETPATH
REACTOME
REACT_22161
Post-translational protein modification pathway
REACT_200727
O-linked glycosylation pathway
REACT_17015
Metabolism of proteins pathway
REACT_200626
O-glycosylation of TSR domain-containing proteins pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt Q9NS62
TrEMBL A0A024R064 F5H419
UniProt Splice Variant
Entrez Gene 55901
UniGene Hs.325667
RefSeq NM_018676 NM_199263
HUGO HGNC:17754
OMIM
CCDS CCDS9432 CCDS9433
HPRD
IMGT
EMBL AB044385 AK315087 AL359513 AY358149 BC063842 CH471274
GenPept AAH63842 AAQ88516 BAA96553 BAG37552 CAH71657 CAM14602 EAW55891 EAW55892 EAW55893 EAW55894 EAW55896
RNA Seq Atlas 55901

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca